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Selected Publications

Glioblastoma

Bhatia, T.N., Ganta, S., Meselhe, M., Sojka, C., Martija, A., Nieland, L., Rufen-Blanchette, U., Sing, A., King, A., Brain Organoid Hub, Bhaduri, A., Hoang, K., Nduom, E., Read, R.D., Olson, J., Sloan, S.A. Region-specific human brain organoids reveal synaptic and cell state drivers of glioblastoma. (2025) bioRxiv (Preprint)

Sojka, C., Wang, H.V., Bhatia, T.N., Li, Y., Chopra, P., Sing, A., Voss, A., King, A., Wang, F., Joseph, K., Ravi, V.M., Olson, J., Hoang, K., Nduom, E., Corces, V.G., Yao, B., Sloan, S.A. Mapping the developmental trajectory of human astrocytes reveals divergence in glioblastoma.* (2025) Nature Cell Biology​

*Cover feature

Darmanis, S.*, Sloan, S.A.*, … Quake, S.A. Single-Cell RNAseq analysis of diffuse neoplastic infiltrating cells at the migrating front of human glioblastoma. (2017) Cell Reports *Co-first authors

F1000

Glial development and biology

Hill, E.J., Sojka, C., Sampson, M.M., Kebede, N., Wang, H.V., Showrin, S., King, A., Sing, A.D., Chang, J., Emory Brain Organoid Hub, Faundez, V., Sampson, T.R., Venneti, S., Sloan, S.A. Temporal regulation of human reactive astrocytes reveals their capacity for antigen presentation.* (2026) Neuron

*Cover feature       Emory Press Release

Sampson, M.M., Sonsurkar, S.J., Nieland, L., Pan, L., Kan, R.L., Azizad, D.J., Li, X., Kebede, N., Lane, A.R., D’Souza, P.E., Panuwet, P., Hill, E.J., Lanjewar, S.N., Voss, A.N., Fawwal, D.V., Sing, A., King, A., Werner, E., Spangle, J.M., Barr, D.B., Bhaduri, A., Zhang, Y., Faundez, V., Sloan, S.A. Lead (Pb) exposure alters neural cell fate in the developing human brain. (2025) bioRxiv

Voss, A..J., Lanjewar, S.N., Sampson, M.M., King, A., Hill, E.J., Sing, A., Sojka, C., Bhatia, T.N., Spangle, J.M., Sloan, S.A. Identification of ligand–receptor pairs that drive human astrocyte development. (2023) Nature Neuroscience

Sloan, S.A., Huber, N., Caneda, C., …, Barres, B.A., Pasca, S. Human Astrocyte Maturation Captured in 3D Cerebral Cortical Spheroids Derived from Pluripotent Stem Cells. (2017) Neuron

Featured Article          Preview          NIH Press Release

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Brosius Lutz, A., Chung, W., Sloan, S.A., … Barres, B.A., Schwann cells use TAM receptor-mediated phagocytosis in addition to autophagy to clear myelin in a mouse model of nerve injury. (2017) PNAS

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Madelaine, R., Sloan S.A., … Barres, B.A., Mourrain, P. Micro RNA-9 Couples Brain Neurogenesis and Angiogenesis. (2017) Cell Reports

Zhang,Y.*, Sloan, S.A.*, Clarke,L., Caneda, C., … Barres, B.A. Purification and characterization of progenitor and mature human astrocytes reveals transcriptional and functional differences with mouse. (2016) Neuron

*Co-first authors                                                         Press Release

Lui, H., Zhang, J., … Sloan, S.A., … Barres, B.A., Huang, E.J. Progranulin deficiency promotes circuit-specific synaptic pruning by microglia via complement activation. (2016) Cell

Zuchero, B., Fu, M.M., Sloan, S.A., … Barres, B.A. CNS myelin wrapping is driven by myelin basic protein-induced actin disassembly. (2015) Developmental Cell

Organoid bioengineering

Cadena, M., Sing, A., Taylor, K., Jin, L., Ning, L., Salar Amoli, M., Singh, Y., Lanjewar, S.N., Tomov, M.L., Serpooshan, V., & Sloan, S.A. A 3D Bioprinted Cortical Organoid Platform for Modeling Human Brain Development. (2024) Advanced Healthcare Materials

Technique Development

Ramelow, C.C., ... Sampson, M.M., ... Sloan S.A., Rangaraju, S. Simultaneous profiling of native-state proteomes and transcriptomes of neural cell types using proximity labeling. (2026) Nature Communications

Yale Press Release

Gupta, I., Collier, P.G., Haase, B., Mahfouz, A., Joglekar, A., Floyd, T., Koopmans, F., Barres, B., Smit, A.B., Sloan, S.A., Luo, W., Fredrigo, O., Ross, M.E., Tilgner, H.U. Single-cell isoform RNA sequencing characterizes isoforms in thousands of cerebellar cells. (2021) Nature Biotechnology

Sloan, S.A., Andersen, J., Birey, F., … Pasca, S. ­­Generation and Assembly of Human Brain Region-Specific 3D Cultures. (2018) Nature Protocols

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Pasca, A.*, Sloan, S.A.*, Clarke, L., Tian, Y., Makinson, C.D., … Barres, B.A., Pasca, S. Functional cortical neurons and astrocytes from human pluripotent stem cells in 3D cultures. (2015) Nature Methods *Co-first authors

NIH Press Release          Spectrum          Key Advances in hIPSC Modeling          F1000

Zhang, Y.*, Chen, K.*, Sloan, S.A.*, Bennett, M.L., Scholze, A.R., … Wu, J.Q. An RNA-Sequencing Transcriptome and Splicing Database of Glia, Neurons, and Vascular Cells of the Cerebral Cortex. (2014) The Journal of Neuroscience *Co-first authors

F1000          BrainRNASeq Website

Darmanis, S., Sloan, S.A., … Barres, B.A., Quake, S. A survey of human brain transcriptome diversity at the single cell level. (2015) PNAS

Reviews

Kebede, N., Sloan, S.A. Defining multipotent intermediate progenitors in cortical development. (2026) Trends in Neurosciences

Sojka, C., Sloan, S.A. Gliomas: a reflection of temporal gliogenic principles. (2024) Communications Biology

Lanjewar, S.N., Sloan, S.A. Growing Glia: Cultivating Human Stem Cell Models of Gliogenesis in Health and Disease. (2021) Frontiers in Cell and Developmental Biology ​

Cadena, M., Ning, L., King, A., Hwang, B., Jin, L., Serpooshan, V.*, Sloan, S.A.* 3D Bioprinting of Neural Tissues. (2020) Advanced Healthcare Materials. *Co-corresponding authors

Resources

Transcriptomic Databases of Human and Mouse Brain 

Data sharing website

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